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Running a subnational level multi-country model

subnational_multinational_models.Rmd

Load your library

Get your data 

cleaned_subnatdata <- get_data(national=FALSE)

Get the JAGS model inputs from the cleaned data 

pkg_data <- get_modelinputs(startyear=1990, endyear=2025.5, nsegments=12, 
                            raw_data = cleaned_subnatdata)

Run JAGS model and get posterior point estimates with uncertainty 

mod <- run_jags_model(jagsdata = pkg_data, jagsparams = NULL, 
                      n_iter = 80000, n_burnin = 10000, n_thin = 35)

Plot posterior point estimates with uncertainty 

plots <- plot_estimates(jagsdata = pkg_data, model_output = mod)